Repositories list

• py-ctcmetrics

  Public
  Cell Tracking metrics and tools for the CellTrackingChallenge as described in 'CHOTA: A Higher Order Accuracy Metric for Cell Tracking'

  multipleobjecttrackingcelltrackingcelltrackingchallenge

  Python

  •

  BSD 2-Clause "Simplified" License

  •2•14•0•0•Updated Aug 22, 2024Aug 22, 2024

• .github

  Public
  Utility repo to maintain this github organization's entry README page

  BSD 2-Clause "Simplified" License

  •0•0•0•0•Updated Aug 21, 2024Aug 21, 2024

• java-ctcmetrics

  Public
  Java implementation of measures for quantitative evaluation of biomedical tracking in general.

  detccact+ 4tftrasegbc-i

  Java

  •

  BSD 2-Clause "Simplified" License

  •1•2•8•0•Updated Aug 21, 2024Aug 21, 2024

• mastodon-ctc

  Public
  Mastodon plugins to import from and export to (not only) the CellTrackingChallenge format

  Java

  •

  BSD 2-Clause "Simplified" License

  •3•0•0•0•Updated May 15, 2024May 15, 2024

• label-fusion-ng

  Public
  Generalized Fiji Tool for Automatic Fusion of Segmentation and Tracking Labels

  silvergtsilver-truthsilver-standard-annotations

  Java

  •

  BSD 2-Clause "Simplified" License

  •0•0•4•0•Updated Apr 5, 2024Apr 5, 2024

• fiji-plugins

  Public
  Front-end Fiji plugins that make accessible the CTC measures.

  Java

  •

  BSD 2-Clause "Simplified" License

  •0•1•0•0•Updated Nov 22, 2023Nov 22, 2023

• 2021-edition-available-colabs

  Public
  Colab Notebooks implementing training and inference for the methods of several contestants participating in the 2021 CTC edition, in order to fulfill the reusability criteria

  Jupyter Notebook

  •

  MIT License

  •1•6•1•0•Updated Sep 28, 2022Sep 28, 2022

• label-fusion-BIC

  Public archive
  A Fiji Tool for Automatic Fusion of Segmentation and Tracking Labels

  Java

  •

  BSD 2-Clause "Simplified" License

  •0•0•0•0•Updated Jan 11, 2022Jan 11, 2022

• CTC-FijiPlugins

  Public archive
  [OBSOLETE] A collection of plugins related to the cell/nucleus tracking, motivated by the Cell Tracking Challenge.

  Java

  •5•10•10•0•Updated Jan 11, 2022Jan 11, 2022