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Merge branch 'master' into dev Markdown linting #192: Commit 7cf9230 pushed by peterk87
August 15, 2023 20:19 16s dev
dev
August 15, 2023 20:19 16s
Merge pull request #38 from CFIA-NCFAD/dev Markdown linting #191: Commit 39b6908 pushed by peterk87
August 15, 2023 20:18 21s master
master
August 15, 2023 20:18 21s
Update usage.md and nextflow_schema.json removing enable_conda and us… Markdown linting #190: Commit 02db6ba pushed by peterk87
August 2, 2023 21:09 18s fix/35-conda-profile-broken
fix/35-conda-profile-broken
August 2, 2023 21:09 18s
Remove gfflu/snpeff processes from PR#29 for #35 bugfix Markdown linting #189: Commit 6838c98 pushed by peterk87
August 2, 2023 21:05 20s fix/35-conda-profile-broken
fix/35-conda-profile-broken
August 2, 2023 21:05 20s
Merge pull request #31 from CFIA-NCFAD/dev Markdown linting #188: Commit b0d6575 pushed by peterk87
August 2, 2023 20:34 22s master
master
August 2, 2023 20:34 22s
Merge pull request #25 from peterk87/feature/add-new-ref-seqs CI #124: Commit f155d43 pushed by peterk87
August 2, 2023 20:34 5s dev
dev
August 2, 2023 20:34 5s
Merge pull request #25 from peterk87/feature/add-new-ref-seqs Markdown linting #187: Commit f155d43 pushed by peterk87
August 2, 2023 20:34 20s dev
dev
August 2, 2023 20:34 20s
Update min Nextflow version to 22.10.1; execution stopped if Nextflow… Markdown linting #186: Commit 6b2b946 pushed by peterk87
July 12, 2023 19:05 24s feature/annotation-snpeff
feature/annotation-snpeff
July 12, 2023 19:05 24s
Add gfflu and SnpEff processes for annotation and variant effect anal… Markdown linting #185: Commit fea8634 pushed by peterk87
July 12, 2023 18:49 17s feature/annotation-snpeff
feature/annotation-snpeff
July 12, 2023 18:49 17s
Update docs Markdown linting #184: Commit 2ed8bf5 pushed by peterk87
July 11, 2023 20:18 20s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 11, 2023 20:18 20s
Update ci.yml Markdown linting #183: Commit b21b89d pushed by peterk87
July 11, 2023 17:12 18s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 11, 2023 17:12 18s
fix pull_top_ref_id.nf Markdown linting #182: Commit dedcfb5 pushed by peterk87
July 11, 2023 16:09 19s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 11, 2023 16:09 19s
parse_influenza_blast_results.py: fix missing var, remove unused thre… Markdown linting #181: Commit f7acaba pushed by peterk87
July 10, 2023 21:05 21s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 10, 2023 21:05 21s
fix merge conflict typo Markdown linting #180: Commit 78c5c4b pushed by peterk87
July 10, 2023 20:18 17s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 10, 2023 20:18 17s
Merge branch 'dev' into feature/add-new-ref-seqs Markdown linting #179: Commit e0b0196 pushed by peterk87
July 10, 2023 20:12 19s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 10, 2023 20:12 19s
bin/parse_influenza_blast_results.py: clean up imports, reindent Markdown linting #178: Commit d223e3b pushed by peterk87
July 10, 2023 16:22 22s patch/fix-27-nodataerror-blast
patch/fix-27-nodataerror-blast
July 10, 2023 16:22 22s
Merge branch 'master' into patch/fix-27-nodataerror-blast Markdown linting #177: Commit 678f23e pushed by peterk87
July 7, 2023 21:33 16s patch/fix-27-nodataerror-blast
patch/fix-27-nodataerror-blast
July 7, 2023 21:33 16s
Fix #27 by catching NoDataError when trying to parse empty BLAST resu… Markdown linting #176: Commit efb0a23 pushed by peterk87
July 7, 2023 21:30 21s patch/fix-27-nodataerror-blast
patch/fix-27-nodataerror-blast
July 7, 2023 21:30 21s
fix parse_influenza_blast_results.py issue with Categorical type and … Markdown linting #175: Commit 0d9db73 pushed by peterk87
July 7, 2023 20:32 20s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 7, 2023 20:32 20s
fix illumina.nf Markdown linting #174: Commit e38c9ca pushed by peterk87
July 7, 2023 19:09 21s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 7, 2023 19:09 21s
fix illumina.nf Markdown linting #173: Commit 00f0409 pushed by peterk87
July 7, 2023 19:00 20s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 7, 2023 19:00 20s
remove missing proc from illumina.nf Markdown linting #172: Commit 7371191 pushed by peterk87
July 7, 2023 18:53 16s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 7, 2023 18:53 16s
Remove/replace references to GUNZIP_NCBI_FLU_FASTA Markdown linting #171: Commit d36b980 pushed by peterk87
July 7, 2023 18:51 24s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 7, 2023 18:51 24s
Update Influenza ref seqs DB to use all Orthomyxoviridae viruses from… Markdown linting #170: Commit dfab8f5 pushed by peterk87
July 7, 2023 17:31 21s feature/add-new-ref-seqs
feature/add-new-ref-seqs
July 7, 2023 17:31 21s
Merge pull request #23 from CFIA-NCFAD/dev Markdown linting #169: Commit 415e7ab pushed by peterk87
June 23, 2023 12:20 17s master
master
June 23, 2023 12:20 17s