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Fix CremonaDatabase constructor #17398

Fix CremonaDatabase constructor

Fix CremonaDatabase constructor #17398

Workflow file for this run

name: Build documentation
on:
pull_request:
merge_group:
push:
tags:
# Match all release tags including beta, rc
- '[0-9]+.[0-9]+'
- '[0-9]+.[0-9]+.[0-9]+'
- '[0-9]+.[0-9]+.beta[0-9]+'
- '[0-9]+.[0-9]+.[0-9]+.beta[0-9]+'
- '[0-9]+.[0-9]+.rc[0-9]+'
- '[0-9]+.[0-9]+.[0-9]+.rc[0-9]+'
branches:
- develop
workflow_dispatch:
# Allow to run manually
inputs:
platform:
description: 'Platform'
required: true
default: 'ubuntu-jammy-standard'
docker_tag:
description: 'Docker tag'
required: true
default: 'dev'
concurrency:
# Cancel previous runs of this workflow for the same branch
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
env:
# Same as in build.yml
TOX_ENV: "docker-${{ github.event.inputs.platform || 'ubuntu-jammy-standard' }}-incremental"
BUILD_IMAGE: "localhost:5000/${{ github.repository }}/sage-${{ github.event.inputs.platform || 'ubuntu-jammy-standard' }}-with-targets:ci"
FROM_DOCKER_REPOSITORY: "ghcr.io/sagemath/sage/"
FROM_DOCKER_TARGET: "with-targets"
FROM_DOCKER_TAG: ${{ github.event.inputs.docker_tag || 'dev'}}
EXTRA_CONFIGURE_ARGS: --enable-fat-binary
jobs:
build-doc:
runs-on: ubuntu-latest
services:
# https://docs.docker.com/build/ci/github-actions/local-registry/
registry:
image: registry:2
ports:
- 5000:5000
steps:
- name: Maximize build disk space
uses: easimon/maximize-build-space@v10
with:
# need space in /var for Docker images
root-reserve-mb: 30000
remove-dotnet: true
remove-android: true
remove-haskell: true
remove-codeql: true
remove-docker-images: true
- name: Checkout
uses: actions/checkout@v4
- name: Install test prerequisites
# From docker.yml
run: |
sudo DEBIAN_FRONTEND=noninteractive apt-get update
sudo DEBIAN_FRONTEND=noninteractive apt-get install tox
sudo apt-get clean
df -h
- name: Merge CI fixes from sagemath/sage
run: |
mkdir -p upstream
.ci/merge-fixes.sh 2>&1 | tee upstream/ci_fixes.log
env:
GH_TOKEN: ${{ github.token }}
SAGE_CI_FIXES_FROM_REPOSITORIES: ${{ vars.SAGE_CI_FIXES_FROM_REPOSITORIES }}
# Building
- name: Generate Dockerfile
# From docker.yml
run: |
tox -e ${{ env.TOX_ENV }}
cp .tox/${{ env.TOX_ENV }}/Dockerfile .
env:
# Only generate the Dockerfile, do not run 'docker build' here
DOCKER_TARGETS: ""
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
with:
driver-opts: network=host
- name: Build Docker image
id: image
uses: docker/build-push-action@v6
with:
# push and load may not be set together at the moment
push: true
load: false
context: .
tags: ${{ env.BUILD_IMAGE }}
target: with-targets
cache-from: type=gha
cache-to: type=gha,mode=max
build-args: |
NUMPROC=6
USE_MAKEFLAGS=-k V=0 SAGE_NUM_THREADS=4 --output-sync=recurse
TARGETS_PRE=build/make/Makefile
TARGETS=ci-build-with-fallback
- name: Start container
id: container
# Try to continue when "exporting to GitHub Actions Cache" failed with timeout
run: |
docker run --name BUILD -dit \
--mount type=bind,src=$(pwd),dst=$(pwd) \
--workdir $(pwd) \
${{ env.BUILD_IMAGE }} /bin/sh
#
# On pull request and push to develop events
#
- name: Get workflow run-id
id: get_run_id
if: steps.container.outcome == 'success' && !startsWith(github.ref, 'refs/tags/') && github.event_name == 'pull_request'
run: |
RESPONSE=$(curl -s -L \
-H "Accept: application/vnd.github+json" \
-H "Authorization: Bearer ${{ secrets.GITHUB_TOKEN }}" \
"https://api.github.com/repos/${{ github.repository }}/actions/runs?event=push&branch=develop&status=completed")
RUN_ID=$(echo "$RESPONSE" | jq -r --arg name "${{ github.workflow }}" --arg conclusion "success" \
'.workflow_runs[] | select(.name == $name and .conclusion == $conclusion) | .id' | head -n 1)
echo "RUN_ID=$RUN_ID" >> $GITHUB_ENV
- name: Download old doc
id: download-doc
if: steps.get_run_id.outcome == 'success'
uses: actions/download-artifact@v4
with:
name: doc-develop
github-token: ${{ secrets.GITHUB_TOKEN }}
repository: ${{ github.repository }}
run-id: ${{ env.RUN_ID }}
- name: Store old doc
id: worktree
if: steps.download-doc.outcome == 'success'
run: |
git config --global --add safe.directory $(pwd)
git config --global user.email "ci-sage@example.com"
git config --global user.name "Build documentation workflow"
unzip doc.zip
rm doc.zip
PR_NUMBER=""
if [[ "$GITHUB_REF" =~ refs/pull/([0-9]+)/merge ]]; then
PR_NUMBER="${BASH_REMATCH[1]}"
fi
# Create CHANGES.html
if [[ -n "$PR_NUMBER" ]]; then
# mathjax path in old doc (regex)
mathjax_path_from="[-./A-Za-z_]*/tex-chtml[.]js?v=[0-9a-f]*"
# mathjax path in new doc
mathjax_path_to=$(docker exec -e SAGE_USE_CDNS=yes BUILD /sage/sage -python -c "from sage_docbuild.conf import mathjax_path; print(mathjax_path)")
new_version=$(docker exec BUILD cat src/VERSION.txt)
# Wipe out chronic diffs between old doc and new doc
(cd doc && \
find . -name "*.html" | xargs sed -i -e '/class="sidebar-brand-text"/ s/Sage [0-9a-z.]* /Sage '"$new_version"' /' \
-e 's;?v=[0-9a-f]*";";' \
-e 's;'"$mathjax_path_from"';'"$mathjax_path_to"';' \
-e '\;<script type="application/vnd\.jupyter\.widget-state+json">;,\;</script>; d' \
-e 's;#L[0-9]*";";' \
-e 's;tab-set--[0-9]*-;tab-set-;' \
&& true)
# Create git repo from old doc
(cd doc && \
git init && \
(echo "*.svg binary"; echo "*.pdf binary") > .gitattributes && \
(echo ".buildinfo"; echo '*.inv'; echo '.git*'; echo '*.svg'; echo '*.pdf'; echo '*.png'; echo 'searchindex.js') > .gitignore && \
git add -A && git commit --quiet -m 'old')
fi
- name: Build doc
id: docbuild
if: steps.container.outcome == 'success' && !startsWith(github.ref, 'refs/tags/')
# Always non-incremental because of the concern that
# incremental docbuild may introduce broken links (inter-file references) though build succeeds
run: |
export GITHUB_REF=${{ github.ref }}
export PR_SHA=${{ github.event.pull_request.head.sha }}
export MAKE="make -j5 --output-sync=recurse" SAGE_NUM_THREADS=5
make doc-clean doc-uninstall
export SAGE_USE_CDNS=yes
export SAGE_DOCBUILD_OPTS="--include-tests-blocks"
./config.status && make sagemath_doc_html-no-deps
shell: sh .ci/docker-exec-script.sh BUILD /sage {0}
- name: Copy doc
id: copy
if: steps.docbuild.outcome == 'success'
run: |
set -ex
# Remove any existing html directory before copying a new one
if [ -d "doc/html" ]; then
rm -rf doc/html
fi
# Simpler "docker cp --follow-link ... doc" does not work
mkdir -p doc
mkdir -p temp
docker cp --follow-link BUILD:/sage/local/share/doc/sage/html temp
docker cp --follow-link BUILD:/sage/local/share/doc/sage/index.html temp
cp -r -L temp/* doc/
# Check if we are on pull request event
PR_NUMBER=""
if [[ -n "$GITHUB_REF" ]]; then
if [[ "$GITHUB_REF" =~ refs/pull/([0-9]+)/merge ]]; then
PR_NUMBER="${BASH_REMATCH[1]}"
fi
fi
# If so, then create CHANGES.html
if [[ -n "$PR_NUMBER" ]]; then
(cd doc && git add -A && git commit --quiet -m 'new')
# Wipe out chronic diffs of new doc against old doc before creating CHANGES.html
(cd doc && \
find . -name "*.html" | xargs sed -i -e '/This is documentation/ s/ built with GitHub PR .* for development/ for development/' \
-e 's;?v=[0-9a-f]*";";' \
-e '\;<script type="application/vnd\.jupyter\.widget-state+json">;,\;</script>; d' \
-e 's;#L[0-9]*";";' \
-e 's;tab-set--[0-9]*-;tab-set-;' \
&& git commit -a -m 'wipe-out')
# Since HEAD is at commit 'wipe-out', HEAD~1 is commit 'new' (new doc), HEAD~2 is commit 'old' (old doc)
(cd doc && git diff $(git rev-parse HEAD~2) -- "*.html") > diff.txt
# Restore the new doc dropping changes by "wipe out"
(cd doc && git checkout --quiet -f HEAD~1)
.ci/create-changes-html.sh diff.txt doc
# Sometimes rm -rf .git errors out because of some diehard hidden files
# So we simply move it out of the doc directory
(cd doc && mv .git ../git && mv .gitattributes ../gitattributes)
mv CHANGES.html doc
fi
# Create the robots.txt file to discourage web crawlers from indexing doc preview webpages
echo "User-agent: *" > doc/robots.txt
echo "Disallow: /" >> doc/robots.txt
# Zip everything for increased performance
zip -r doc.zip doc
- name: Upload doc
id: upload
if: steps.copy.outcome == 'success'
uses: actions/upload-artifact@v4
with:
name: doc
path: doc.zip
- name: Upload doc-develop
# artifact doc-develop is used for doc build on pull request event
id: upload-push
if: steps.copy.outcome == 'success' && github.event_name == 'push'
uses: actions/upload-artifact@v4
with:
name: doc-${{ github.ref_name }}
path: doc.zip
#
# On release tag event
#
- name: Build live doc
id: buildlivedoc
if: startsWith(github.ref, 'refs/tags/')
run: |
# Avoid running out of disk space
rm -rf upstream
export MAKE="make -j5 --output-sync=recurse" SAGE_NUM_THREADS=5
export PATH="build/bin:$PATH"
eval $(sage-print-system-package-command auto update)
eval $(sage-print-system-package-command auto --yes --no-install-recommends install zip)
eval $(sage-print-system-package-command auto --spkg --yes --no-install-recommends install git texlive texlive_luatex free_fonts xindy)
export SAGE_USE_CDNS=yes
export SAGE_LIVE_DOC=yes
export SAGE_JUPYTER_SERVER=binder:sagemath/sage-binder-env/dev
make doc-clean doc-uninstall
./config.status && make sagemath_doc_html-no-deps sagemath_doc_pdf-no-deps
shell: sh .ci/docker-exec-script.sh BUILD /sage {0}
- name: Copy live doc
id: copylivedoc
if: steps.buildlivedoc.outcome == 'success'
run: |
mkdir -p ./livedoc
# We copy everything to a local folder
docker cp --follow-link BUILD:/sage/local/share/doc/sage/html livedoc
docker cp --follow-link BUILD:/sage/local/share/doc/sage/pdf livedoc
docker cp --follow-link BUILD:/sage/local/share/doc/sage/index.html livedoc
zip -r livedoc.zip livedoc
- name: Upload live doc
if: steps.copylivedoc.outcome == 'success'
uses: actions/upload-artifact@v4
with:
name: livedoc
path: livedoc.zip