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next-preprocesshisto
next-preprocesshisto PublicA pipeline to preprocess H&E slides in input. The slides will go through a thresholding and edge detection to isolate the tissue before being tessellated into small patches for downstream analysis.
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ML_opt_model
ML_opt_model PublicPrediction of relapse patient status from Radiomics features
Python
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modules
modules PublicForked from nf-core/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow
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scrnaseq
scrnaseq PublicForked from nf-core/scrnaseq
A single-cell RNAseq pipeline for 10X genomics data
Nextflow
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marugoto
marugoto PublicForked from KatherLab/marugoto
Tools to build deep learning pipelines.
Python
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