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geertvangeest committed Oct 13, 2024
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Expand Up @@ -140,7 +140,7 @@ Below you'll find a curated list of **bioinformatics training material**. All ma
- [**carpentries-incubator** carpentries-incubator/python-packaging-publishing](https://github.com/carpentries-incubator/python-packaging-publishing) | [website](https://carpentries-incubator.github.io/python-packaging-publishing/)
- [**carpentries-incubator** carpentries-incubator/lesson-parallel-python](https://github.com/carpentries-incubator/lesson-parallel-python) | [website](https://carpentries-incubator.github.io/lesson-parallel-python/)
- [**Data Carpentry** datacarpentry/python-ecology-lesson](https://github.com/datacarpentry/python-ecology-lesson) | [website](https://datacarpentry.org/python-ecology-lesson)
- [**The Algorithms** TheAlgorithms/Python](https://github.com/TheAlgorithms/Python) | [website](https://the-algorithms.com)
- [**The Algorithms** TheAlgorithms/Python](https://github.com/TheAlgorithms/Python) | [website](https://thealgorithms.github.io/Python/)
- [**Oleksii Trekhleb** trekhleb/learn-python](https://github.com/trekhleb/learn-python)
- [**João Ventura** joaoventura/full-speed-python](https://github.com/joaoventura/full-speed-python)
- [**Sebastian Raschka** rasbt/python_reference](https://github.com/rasbt/python_reference)
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- [**RStudio** rstudio/rmarkdown-book](https://github.com/rstudio/rmarkdown-book) | [website](https://bookdown.org/yihui/rmarkdown)
- [**Saskia** SaskiaFreytag/biocommons-r-intro](https://github.com/SaskiaFreytag/biocommons-r-intro) | [website](https://saskiafreytag.github.io/biocommons-r-intro/)
- [**Sean Davis** seandavi/ITR](https://github.com/seandavi/ITR) | [website](https://seandavi.github.io/ITR)
- [**SIB Swiss Institute of Bioinformatics** sib-swiss/enrichment-analysis-training](https://github.com/sib-swiss/enrichment-analysis-training)
- [**SIB Swiss Institute of Bioinformatics** sib-swiss/enrichment-analysis-training](https://github.com/sib-swiss/enrichment-analysis-training) | [website](https://sib-swiss.github.io/enrichment-analysis-training/)
- [**SIB Swiss Institute of Bioinformatics** sib-swiss/first-steps-with-R-training](https://github.com/sib-swiss/first-steps-with-R-training)
- [**Software Carpentry** swcarpentry/r-novice-gapminder](https://github.com/swcarpentry/r-novice-gapminder) | [website](http://swcarpentry.github.io/r-novice-gapminder/)
- [**Research IT, University of Manchester, UK** UoMResearchIT/r-tidyverse-intro](https://github.com/UoMResearchIT/r-tidyverse-intro) | [website](https://UoMResearchIT.github.io/r-tidyverse-intro)
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- [**Sergio Martínez Cuesta** semacu/20180531_DataVisualisationRggplot2_Wolfson_Cambridge](https://github.com/semacu/20180531_DataVisualisationRggplot2_Wolfson_Cambridge)
- [**Data Carpentry** datacarpentry/ecology-workshop](https://github.com/datacarpentry/ecology-workshop) | [website](http://www.datacarpentry.org/ecology-workshop/)
- [**Jacques van Helden** jvanheld/stats_avec_RStudio_EBA](https://github.com/jvanheld/stats_avec_RStudio_EBA) | [website](http://jvanheld.github.io/stats_avec_RStudio_EBA/)
- [**proback** proback/BeyondMLR](https://github.com/proback/BeyondMLR)
- [**Paul Roback** proback/BeyondMLR](https://github.com/proback/BeyondMLR)
- [**Data Challenge Lab Open Content** dcl-docs/prog](https://github.com/dcl-docs/prog) | [website](https://dcl-prog.stanford.edu)
- [**G. Jay Kerns** gjkerns/IPSUR](https://github.com/gjkerns/IPSUR) | [website](http://ipsur.org)
- [**Roger D. Peng** rdpeng/rprogdatascience](https://github.com/rdpeng/rprogdatascience)
- [**Marek Gagolewski** gagolews/deepr](https://github.com/gagolews/deepr) | [website](https://deepr.gagolewski.com)
- [**bougioukas** bougioukas/practical_stats_med-r](https://github.com/bougioukas/practical_stats_med-r)
- [**TaniaW** taniawyss/flow-cytometry-analysis-with-R](https://github.com/taniawyss/flow-cytometry-analysis-with-R/)
- [**TaniaW** taniawyss/flow-cytometry-analysis-with-R](https://github.com/taniawyss/flow-cytometry-analysis-with-R/) | [website](https://taniawyss.github.io/flow-cytometry-analysis-with-R/)
- [**Roger D. Peng** rdpeng/exdata](https://github.com/rdpeng/exdata)
- [**Rafael A Irizarry** rafalab/dsbook-part-1](https://github.com/rafalab/dsbook-part-1)
- [**Rafael A Irizarry** rafalab/dsbook-part-2](https://github.com/rafalab/dsbook-part-2)
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- [**JD Long** CerebralMastication/R-Cookbook](https://github.com/CerebralMastication/R-Cookbook)
- [**r-spark** r-spark/the-r-in-spark](https://github.com/r-spark/the-r-in-spark) | [website](http://therinspark.com)
- [**R for the Rest of Us** rfortherestofus/book](https://github.com/rfortherestofus/book)
- [**mictes** mictes/Shiny_Tutorial](https://github.com/mictes/Shiny_Tutorial) | [website](https://mictes.github.io/Shiny_Tutorial/)
- [**Michael Teske** mictes/Shiny_Tutorial](https://github.com/mictes/Shiny_Tutorial) | [website](https://mictes.github.io/Shiny_Tutorial/)
- [**jjallaire** jjallaire/hopr](https://github.com/jjallaire/hopr)
- [**Rohan Alexander** RohanAlexander/telling_stories](https://github.com/RohanAlexander/telling_stories/) | [website](https://rohanalexander.github.io/telling_stories/)
- [**Leonardo Collado-Torres** lcolladotor/cshl_rstats_genome_scale_2024](https://github.com/lcolladotor/cshl_rstats_genome_scale_2024) | [website](https://lcolladotor.github.io/cshl_rstats_genome_scale_2024)
- [**Sophie Lee** sophie-a-lee/Introduction_R_Tidyverse_course](https://github.com/sophie-a-lee/Introduction_R_Tidyverse_course) | [website](https://introduction-r-tidyverse.netlify.app)
- [**Sophie Lee** sophie-a-lee/introduction_rstudio_dluch](https://github.com/sophie-a-lee/introduction_rstudio_dluch) | [website](https://intro-r-dluch.netlify.app)
- [**Sophie Lee** sophie-a-lee/intro-rstudio-mhclg](https://github.com/sophie-a-lee/introduction_rstudio_dluch) | [website](https://intro-r-dluch.netlify.app)
- [**Stephen Turner** stephenturner/workshops](https://github.com/stephenturner/workshops) | [website](http://stephenturner.github.io/workshops)
- [**Fred Hutch Data Science Lab** fhdsl/Tools_for_Reproducible_Workflows_in_R](https://github.com/fhdsl/Tools_for_Reproducible_Workflows_in_R) | [website](https://hutchdatascience.org/Tools_for_Reproducible_Workflows_in_R/)
- [**Aditya Dahiya** Aditya-Dahiya/ggplot2book3e](https://github.com/Aditya-Dahiya/ggplot2book3e/)
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- [**NBIS - National Bioinformatics Infrastructure Sweden** NBISweden/module-openrefine-dm-practices](https://github.com/NBISweden/module-openrefine-dm-practices/) | [website](https://nbisweden.github.io/module-openrefine-dm-practices/)
- [**Pablo Casas** pablo14/data-science-live-book](https://github.com/pablo14/data-science-live-book) | [website](http://livebook.datascienceheroes.com)
- [**Roger D. Peng** rdpeng/artofdatascience](https://github.com/rdpeng/artofdatascience)
- [**Data Science 8** data-8/textbook](https://github.com/data-8/textbook) | [website](http://www.inferentialthinking.com)
- [**UC Berkeley Data 8** data-8/textbook](https://github.com/data-8/textbook) | [website](http://www.inferentialthinking.com)
- [**Federico Carrone** unbalancedparentheses/data_science_in_julia_for_hackers](https://github.com/unbalancedparentheses/data_science_in_julia_for_hackers) | [website](https://datasciencejuliahackers.com)
- [**Berkeley Data Science 100** DS-100/textbook](https://github.com/DS-100/textbook/) | [website](https://learningds.org)
- [**UC Berkeley Data 100** DS-100/textbook](https://github.com/DS-100/textbook/) | [website](https://learningds.org)
- [**Edwin Thoen** EdwinTh/ADSwR](https://github.com/edwinth/ADSwR) | [website](https://edwinth.github.io/ADSwR/)
- [**tidyverse** tidyverse/datascience-box](https://github.com/tidyverse/datascience-box) | [website](https://datasciencebox.org)
- [**Modern Data Science with R** mdsr-book/mdsr-book.github.io](https://github.com/mdsr-book/mdsr-book.github.io)
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