ClairS - a deep-learning method for long-read somatic small variant calling
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Updated
Jul 11, 2024 - Python
ClairS - a deep-learning method for long-read somatic small variant calling
simplified cellranger for long-read data
Structural variation caller using third generation sequencing
Variant Calling and Annotation using PacBio Hi-Fi Reads
Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)
a tool to identify species and inter-species hybrids and chromosome copy number variants from high-throughput sequencing data
Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
Amplicon sequencing analysis workflow using DADA2 and QIIME2
A phase-aware pharmacogenomic diplotyper for PacBio datasets
Bioinformatics pipeline for recovery and analysis of metagenome-assembled genomes
A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies
A pipeline for metabarcoding fungi and other eukaryotes with full-length ITS sequenced with PacBio
Lightweight bioinformatics pipeline for microbial genome recovery
Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads
A collection of bioinformatics tools for use with galaxy written at Quadram Institute
Mitochondrial Long-read Iterative Assembly
Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling
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