Patpat: A Python-based framework for searching public proteomics datasets
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Updated
Apr 22, 2023 - Python
Patpat: A Python-based framework for searching public proteomics datasets
Complementary Finder and MSn deconvolution processing nodes for Thermo Proteome Discoverer 2.x.
Inspecting the quality of isobaric labeling proteomic data in a Jupyter notebook. Data output from Proteome Discoverer.
Pipeline and Shiny app for the dowstream analysis of quantitative proteomic data
Script for quantification of glucosaminoglycans (GAGs) based on Proteome Discoverer output, with web-interface powered by Bokeh
QC scripts for LC-MS proteomic equipment based on Proteome Discoverer 2.4 output
Proteome Discoverer Result File Reader
A simple python script to fix scan numbers in result files generated by Proteome Discoverer.
Provides easy access to Thermo Discoverer platform results
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