Python script to generate sequence feature tables (for data analysis, machine learning, etc)
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Updated
Dec 13, 2020 - Csound Score
Python script to generate sequence feature tables (for data analysis, machine learning, etc)
Concepts in sequencing data analysis.
VerdAscend tools collection for bioinformatics, thermodynamics, DNA sequence data analysis
K-Means, Geo2Vec and Sequence Analysis on IP-Probe mobile data to cluster the flows of tourists in the Tuscany Region.
A GLUE project for Deltaretroviruses
Detection of possible sumoylation sites that emerges through mutations in different cancers where mutations are mapped into sequence and analyzed
Analysis of FASTA ,Protein,DNA sequence.
Using sequence and cluster analysis to analyse change over time in fuel poverty estimates.
Source code and data of the paper entitled "i6mA-CNN: Identifying DNA N6-Methyladenine Sites in Mice using Convolutional Neural Networks with Multiple Kernel Sizes"
Implementing Position Specific Scoring Matrix (PSSM) Algorithm using Python for computational biological tasks.
Very small utilities for interrogating fasta and fastq files
Application that can find peptide and nucleotide sequences from FASTA or text files.
Sequence Analysis Pipeline for the IRIDA Platform for Viral Genomes
Sequence management tools relying on the Bioinformatics Databank Manager System, BeeDeeM (miror).
Extension to RABV-GLUE capturing NCBI data.
C++ code for symbolic sequence processing, including genomic sequence processing (GSP)
Archive of personal scripts repository from my various projects in the Buell Lab at MSU (Jan. 2008 - Apr. 2011)
WINEPI Episode Mining algorithm for R based on Python implementation by duytri and nkmrtty
GRAMEP - Genome vaRiation Analysis from the Maximum Entropy Principle
A GLUE project for Lentiviruses (genus Lentivirus)
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