Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
yil8 committed Jan 14, 2016
1 parent 1d3fdac commit ae1585e
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -233,7 +233,7 @@ where you run the command. The R script will output a segments file `segments.DN

Example data
------------
We used [Homo_sapiens_assembly18.fasta](http://www.broadinstitute.org/ftp/pub/seq/references/Homo_sapiens_assembly18.fasta) from Broad Institute as the REFERENCE_GENOME.fasta in the original paper. One example of simulation data can be found [here](http://www.ics.uci.edu/~yil8/public_data/PyLOH/). Please use binary mode to download the BAM file(e.g. wget command), directly ftp download using browser may corrupt the BAM file. The ground truth tumor purity of this data is 90%.
We used [Homo_sapiens_assembly18.fasta](http://www.broadinstitute.org/ftp/pub/seq/references/Homo_sapiens_assembly18.fasta) from Broad Institute as the REFERENCE_GENOME.fasta in the original paper. One example of simulation data can be found [here](https://cbcl.ics.uci.edu/public_data/PyLOH/). Please use binary mode to download the BAM file(e.g. wget command), directly ftp download using browser may corrupt the BAM file. The ground truth tumor purity of this data is 90%.


Reference
Expand Down

0 comments on commit ae1585e

Please sign in to comment.