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@veg

iGEM/UCSD evolutionary biology and bioinformatics group

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  1. hyphy hyphy Public

    HyPhy: Hypothesis testing using Phylogenies

    HyPhy 222 69

  2. hivtrace hivtrace Public

    JavaScript 23 15

  3. phylotree.js phylotree.js Public

    Interactive viewer of phylogenetic trees

    JavaScript 169 78

Repositories

Showing 10 of 87 repositories
  • MSS-results Public
    veg/MSS-results’s past year of commit activity
    HyPhy 0 1 0 0 Updated Nov 21, 2024
  • datamonkey-js Public

    Datamonkey - Run state-of-the-art statistical models through the comfort of your browser

    veg/datamonkey-js’s past year of commit activity
    JavaScript 10 9 1 6 Updated Nov 21, 2024
  • hivtrace-viz Public
    veg/hivtrace-viz’s past year of commit activity
    JavaScript 8 9 0 3 Updated Nov 19, 2024
  • hivtrace Public
    veg/hivtrace’s past year of commit activity
    JavaScript 23 MIT 15 5 1 Updated Nov 15, 2024
  • hyphy-vision Public

    Visualize HyPhy results in your browser

    veg/hyphy-vision’s past year of commit activity
    JavaScript 4 12 1 4 Updated Nov 13, 2024
  • datamonkey-js-server Public
    veg/datamonkey-js-server’s past year of commit activity
    HyPhy 3 7 0 1 Updated Nov 13, 2024
  • hyphy-analyses Public

    HyPhy standalone analyses

    veg/hyphy-analyses’s past year of commit activity
    PostScript 39 MIT 17 37 0 Updated Nov 13, 2024
  • hyphy Public

    HyPhy: Hypothesis testing using Phylogenies

    veg/hyphy’s past year of commit activity
    HyPhy 222 69 14 0 Updated Oct 22, 2024
  • cawlign Public
    veg/cawlign’s past year of commit activity
    C++ 2 MIT 2 2 0 Updated Oct 2, 2024
  • hivclustering Public

    Infer molecular transmission networks from pairwise distance files (part of HIV-TRACE)

    veg/hivclustering’s past year of commit activity
    Python 3 5 10 1 Updated Oct 1, 2024
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