Remove unused STAR_CLEANUP_SCRIPT config

PavlidisLab · May 17, 2024 · acf0e84 · acf0e84
1 parent 0765dcb
commit acf0e84
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diff --git a/example.luigi.cfg b/example.luigi.cfg
@@ -45,9 +45,6 @@ ALIGNQCDIR=aligned-qc
 QUANTDIR=quantified
 BATCHINFODIR=batch-info
 
-# STAR
-STAR_CLEANUP_SCRIPT=scripts/clean-unused-shm-objects
-
 # RSEM
 RSEM_DIR=contrib/RSEM
 

diff --git a/rnaseq_pipeline/config.py b/rnaseq_pipeline/config.py
@@ -16,8 +16,6 @@ class rnaseq_pipeline(luigi.Config):
     QUANTDIR = luigi.Parameter()
     BATCHINFODIR = luigi.Parameter()
 
-    STAR_CLEANUP_SCRIPT = luigi.Parameter()
-
     RSEM_DIR = luigi.Parameter()
 
     GEMMACLI = luigi.Parameter()