Update ref panel outputs; fix CleanVcf template

broadinstitute · Jan 17, 2024 · a08e0c5 · a08e0c5
1 parent 935dffc
commit a08e0c5
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Showing 2 changed files with 103 additions and 153 deletions.
diff --git a/inputs/templates/test/MakeCohortVcf/CleanVcf.json.tmpl b/inputs/templates/test/MakeCohortVcf/CleanVcf.json.tmpl
@@ -22,6 +22,6 @@
  "CleanVcf.cohort_name": {{ test_batch.name | tojson }},
  "CleanVcf.ped_file": {{ test_batch.ped_file | tojson }},
  "CleanVcf.complex_genotype_vcfs": {{ test_batch.complex_genotype_vcfs | tojson }},
- "CleanVcf.complex_resolve_bothside_pass_lists": {{ test_batch.complex_resolve_bothside_pass_lists | tojson }},
- "CleanVcf.complex_resolve_background_fail_lists": {{ test_batch.complex_resolve_background_fail_lists | tojson }}
+ "CleanVcf.complex_resolve_bothside_pass_list": {{ test_batch.complex_resolve_bothside_pass_list | tojson }},
+ "CleanVcf.complex_resolve_background_fail_list": {{ test_batch.complex_resolve_background_fail_list | tojson }}
 }