Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update batch effect workflows #435

Open
wants to merge 1 commit into
base: main
Choose a base branch
from
Open

Update batch effect workflows #435

wants to merge 1 commit into from

Conversation

mwalker174
Copy link
Collaborator

Pulls in 2 updated workflows for batch effect detection that were used for gnomAD-v3. Here I have successfully tested them on a small cross-section of the data (a few hundred variants on chr1). As these workflows are still experimental, I have not included json templates.

Credit to @RCollins13 for authoring the workflows and methods here.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

1 participant